Package name: (1S,2R,5R,8R,8aR)-5-[2-(4-tert-butylphenyl)ethyl]-2,3,4,5,6,7,8,8a-octahydro-1H-indolizin-4-ium-1,2,8-triol

Package ID: 1553
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:07:31
Modified at 2016-09-03 23:07:31

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:07:31 | Modified at 2016-10-29 12:07:06 | [download zip]
Type Description Hash (SHA1)
Topology HN6-ion-1.itp a13790c5662486fbd17e7fd834e453d93e4467aa
Structure HN6-ion-1.pdb 16eb533995d25084833c6f4e90143b90e6c35c9c

Compound details

Ligand code HN6
Molecule identifier 8057949BC72F7B1D
Displayed name (1S,2R,5R,8R,8aR)-5-[2-(4-tert-butylphenyl)ethyl]-2,3,4,5,6,7,8,8a-octahydro-1H-indolizin-4-ium-1,2,8-triol
Canonical IUPAC name (1S,2R,5R,8R,8aR)-5-[2-(4-tert-butylphenyl)ethyl]-2,3,4,5,6,7,8,8a-octahydro-1H-indolizin-4-ium-1,2,8-triol
Formula C20H32NO3
Molecular weight 334.48
Charge 1
Number of atoms 56
SMILES C3[NH+]2[C@H](CCC1=CC=C(C(C)(C)C)C=C1)CC[C@H]([C@@H]2[C@H](O)[C@@H]3O)O
PubChem CID 72199812
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)