Package name: 4-[[(3S,5S,8R,9S,10S,13S,14S,17S)-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4-oxidanylidene-butanoic acid

Package ID: 2342
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:09:22
Modified at 2016-09-03 23:09:22

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:09:22 | Modified at 2016-10-29 12:09:11 | [download zip]
Type Description Hash (SHA1)
Topology S5H-ion-1.itp 62de860e7ccea479535f4f691212bbd29a158732
Structure S5H-ion-1.pdb 0d476613b0d47e8e2cb06c0a88aa826dd64b4498

Compound details

Ligand code S5H
Molecule identifier BE14F6695D238B6E
Displayed name 4-[[(3S,5S,8R,9S,10S,13S,14S,17S)-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4-oxidanylidene-butanoic acid
Canonical IUPAC name 4-[[(3S,5S,8R,9S,10S,13S,14S,17S)-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4-oxidanylidene-butanoic acid
Formula C25H37O5
Molecular weight 417.56
Charge -1
Number of atoms 67
SMILES [C@H]4(OC(=O)CCC(=O)[O-])CC[C@]3(C)[C@H]2CC[C@]1(C)[C@@H](C(=O)C)CC[C@H]1[C@@H]2CC[C@H]3C4
PubChem CID 5289324
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)